Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954896.1_cds_XP_016493596.1_83689
CDS Infomation

[gene=LOC107812925] [db_xref=GeneID:107812925] [protein=katanin p60 ATPase-containing subunit A1-like isoform X1] [protein_id=XP_016493596.1] [location=join(12060..12181,12657..13122,13559..13756,14070..14314,14608..14766,14857..14944,16649..16930)] [gbkey=CDS]
Sequence

ATGGTGGGTGGAGCATTGGCAGGGTTACAAGATCATGTGAAATTGGCAAGAGAATATGCA
GTTGAAGGCCTTTATGACACTTCCGTCATCTTCTTCGATGGCGCTATCGCTCAGATCAAC
AAGCACTTAAACACACTTGATGATCCTTTGATTCGTTCAAAATGGATGAATGTAAAGAAA
GCAATTTCCGAGGAAACAGAGGTAGTGAAACAATTGGACGCCGAGAAAAGGGCTTTTAAG
GAGGTTCCTATGGGGGGTAGACGTCCTAATTCACCTCCGATTTCGACCAAGTCATCTTCT
TTTGTCTTTCAACCGCTTGATGAGTACCCCACCTCATCTGGTGCTCCAATGGATGACCCT
GATGTTTGGAGACCACCTAGTCGAGACACATCAAGAAGATCTGCAAGAGCCGGTCCAGGG
GGTATGAGAAAGGGCCCACAAGATGGAGCCTGGGCTCGTGGATCTACAAAGACTGGAACC
ACAGGCCGTGGAGGAAGGACCACTGGCTCTACTAAGGCTACTTCTGCAGTTCGATCTTCA
ACTACTGGGAGAAAAGGACCTGGAAAATCCACAAAAACCGACTCTACGGATGGTGATGCT
GAAGAAGGGAAGAGTAAAAAAGGTCAGTACGAGGGGCCTGATGCGGACCTGGCTGCTATG
CTTGAGAGGGATGTCTTGGATTCCACCCCTGGTGTGAGATGGGACGATGTTGCTGGGTTA
AGTGAAGCCAAAAGACTTTTGGAGGAAGCAGTTGTTCTCCCATTATGGATGCCAGATTAT
TTCCAGGGAATCAGGAGACCATGGAAGGGTGTTCTTATGTTTGGGCCTCCTGGAACGGGG
AAGACACTTTTGGCTAAGGCTGTTGCTACAGAGTGTGGGACGACATTTTTCAATGTTTCT
TCTGCCACCTTGGCTTCAAAATGGCGTGGGGAGAGTGAACGCATGGTGCGGTGCTTGTTT
GATCTTGCTCGCGCTTATGCTCCTAGTACAATTTTCATTGATGAGATCGATTCTCTTTGT
AATGCCCGAGGGGGTTCAGGAGAGCATGAATCATCCCGAAGGGTGAAGTCTGAACTTCTT
GTTCAGGTAGATGGCGTAAGCAACTCTTCCACTAATGAAGATGGCACTCGGAAGATTGTG
ATGGTTTTAGCAGCTACAAACTTTCCATGGGACATAGATGAGGCATTAAGGAGACGTTTG
GAAAAACGTATATATATCCCCCTACCTAGCTTTGAGAGTAGGAAGGAGCTTATACGGATC
AATTTGAAAAGTATTGAGGTAGCTCCAGATGTGGACATAGAGGAAGTGGCTCGTAAAACA
GAGGGATATAGTGGAGATGACCTCACAAATGTCTGCCGAGATGCTTCTATGAATGGGATG
AGAAGAATGATAGCTGGGAAGACCCGTGAGGAGATTAAGAACATGTCTAAGGATGAGATT
GCTAAGGATCCTGTTGCAATGTGCGACTTTGTAGAAGCCATTAGCAAAGTTCAACCCAGT
GTCTCAGCTGCTGACATTGAAAAACATGAGAAATGGTTTTCGGAATTTGGATCAGCTTAA

Peptide Sequence

PEP ID

XP_016493596.1
PEP Infomation

PREDICTED: katanin p60 ATPase-containing subunit A1-like isoform X1 [Nicotiana tabacum]
Sequence

MVGGALAGLQDHVKLAREYAVEGLYDTSVIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK
AISEETEVVKQLDAEKRAFKEVPMGGRRPNSPPISTKSSSFVFQPLDEYPTSSGAPMDDP
DVWRPPSRDTSRRSARAGPGGMRKGPQDGAWARGSTKTGTTGRGGRTTGSTKATSAVRSS
TTGRKGPGKSTKTDSTDGDAEEGKSKKGQYEGPDADLAAMLERDVLDSTPGVRWDDVAGL
SEAKRLLEEAVVLPLWMPDYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS
SATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGGSGEHESSRRVKSELL
VQVDGVSNSSTNEDGTRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPSFESRKELIRI
NLKSIEVAPDVDIEEVARKTEGYSGDDLTNVCRDASMNGMRRMIAGKTREEIKNMSKDEI
AKDPVAMCDFVEAISKVQPSVSAADIEKHEKWFSEFGSA

Transcript Sequence

Gene sequence data has not been registered.